Explanation for binary files inside source package according to
  http://lists.debian.org/debian-devel/2013/09/msg00332.html

Files: inst/extdata/SRR027894subRBM17.bam*
  The documentation inst/doc/intro.Rnw says:
    Sample raw data is from SRA(Short Read Archive), Accession: SRR027894
    and subset the gene at chr10:6118023-6137427, which within gene
    RBM17. contains junction reads.

Files: data/crc1.GeRL.rda
  As explained in man/crc1.GeRL.Rd this is a data set of a CRC-1 mutation
  and structural rearrangment and described in
 . 
    Bass AJ, Lawrence MS, Brace LE, Ramos AH, Drier Y, Cibulskis K,
    Sougnez C, Voet D, Saksena G, Sivachenko A, Jing R, Parkin M, Pugh T,
    Verhaak RG, Stransky N, Boutin AT, Barretina J, Solit DB, Vakiani E,
    Shao W, Mishina Y, Warmuth M, Jimenez J, Chiang DY, Signoretti S, Kaelin
    WG, Spardy N, Hahn WC, Hoshida Y, Ogino S, Depinho RA, Chin L, Garraway
    LA, Fuchs CS, Baselga J, Tabernero J, Gabriel S, Lander ES, Getz G,
    Meyerson M.
    "Genomic sequencing of colorectal adenocarcinomas identifies a recurrent VTI1A-TCF7L2 fusion."
    Nat Genet. 2011 Sep 4;43(10):964-8. doi: 10.1038/ng.936.

Files: data/darned_hg19_subset500.rda
  As explained in man/darned_hg19_subset500.Rd this data set provides a
  subset(500 sites only) of hg19 RNA editing sites, and originally from
  DARNED (http://darned.ucc.ie/) for the hg19 assembly.

Files: data/genesymbol.rda
  As explained in man/genesymbol.Rd this data set provides gene symbols in
  human with position and starnd information, stored as GRanges object.
  .
  These data can be obtained for example from
     http://www.genecards.org/cgi-bin/carddisp.pl?gene=RBM17

Files: data/hg19Ideogram.rda
  As explained in man/hg19Ideogram.Rd this data set provides hg19 genome
  information without cytoband information.
  .
  These human genome data can be obtained for instance from
     http://hgdownload.cse.ucsc.edu/goldenpath/hg19/database/

Files: data/hg19IdeogramCyto.rda
  As explained in man/hg19IdeogramCyto.Rd this data set provides hg19 genome
  information with cytoband information.
  .
  These human genome data can be obtained for instance from
     http://hgdownload.cse.ucsc.edu/goldenpath/hg19/database/

Files: build/vignette.rds
 As explained in inst/doc/intro.Rnw this vignette demonstrates some color
 schemes and different utilities functions using simple examples and data
 sets.


 -- Andreas Tille <tille@debian.org>  Sun, 29 Dec 2013 18:56:22 +0100

